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1 Bio 3, Bioinformatics and Molecular Genetics, University of Freiburg, Germany
2 ZBSA Freiburg Center for Systems Biology, University of Freiburg, Germany
3 Renal Division, University Hospital Freiburg, Germany
(Requests for offprints should be addressed to R Baumeister at the Freiburg Center for Systems Biology; Email: baumeister{at}celegans.de)
| Abstract |
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| Introduction |
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Despite its obvious simplicity, organogenesis and even complex behaviors (e.g. associative learning and the response to noxious stimuli) can be studied, and dysfunctions can be attributed to defects in individual cells. In addition, the animals are amenable to molecular, genetic, and biochemical analyses allowing the identification of protein interactions and suppressor mutants and, thus, to the dissection of entire regulatory pathways (Chalfie & Jorgensen 1998). It is very easy to generate mutations in C. elegans and since the animals self-fertilize as hermaphrodites, mutations can be made homozygous simply as a result of Mendelian segregation. The existence of a second sex (males), together with a significantly shorter generation time (around 3 days at 20 °C) than other sexually reproducing model organisms, including Drosophila melanogaster, Zebrafish Danio rerio, and mouse, greatly facilitates genetic crossings of several mutants. This allows conducting epistasis analyses and other studies that use Mendelian genetics to arrange mutants (and therefore genes) in regulatory pathways. These tools have facilitated the dissection of signaling pathways in a way that is only possible in one other invertebrate organism, the fruit fly Drosophila. Most of the pathways identified through worm genetics are conserved in evolution, which is not surprising given that the homologs of more than 50% of the C. elegans genes that were identified after sequencing the entire genome in 1998 have counterparts in other genomes, including the human genome (Sonnhammer & Durbin 1997).
Similarly, holistic endeavors are presently focusing on establishing an interactome (the interaction map of all protein encoded in the genome) (Walhout et al. 2000, Li et al. 2004) and the generation of deletion mutants of each of the roughly 19 000 reading frames. The discovery of RNA interference (RNAi) in C. elegans allowed for the first time a rapid silencing of gene activity in order to assess its underlying function, without the necessity of tedious procedures to find/ generate mutants by deletion screenings. Exposing C. elegans to double-stranded RNA, either by injection or simply by feeding bacteria that produce them, causes a reduction in the level of mRNA for the corresponding endogenous gene (Fire et al. 1998).
Recent research has shown that large-scale experimental setups (e.g. using automated sorting and analysis of the animals) are manageable (Couillault et al. 2004, Hertweck & Baumeister 2005, Rea et al. 2005), so that systematic searches for genes affecting particular behaviors or phenotypes can be conducted by genome-wide RNAi analysis. Such screens have already provided valuable information about genes involved in lipid biosynthesis and storage (Mak et al. 2006), regulatory micro-RNAs (Mansfield et al. 2004), neurotrans-mission, and the control of developmental decisions, stress response, and lifespan (Lee et al. 2003, Hamilton et al. 2005, Hansen et al. 2005). Novel high-throughput techniques in molecular biology were used consequently to combine several of these approaches. For example, the C. elegans ORFeome library, comprising the open reading frames of C. elegans genes cloned into a shuttle vector using the Gateway technology (Invitrogen) (Reboul et al. 2003), was transferred in its entirity into a RNAi expression vector to facilitate genome-wide RNAi studies (Johnson et al. 2005).
The majority of research performed in the worm to elucidate endocrine function has so far focused on the regulatory mechanisms controlling stress response and longevity. There is considerable evidence now that these regulatory mechanisms share a remarkable conservation in evolution, suggesting that a common mechanism which controls longevity by hormones seems to exist (Kenyon et al. 1993). In this review, we want to focus on C. elegans endocrine research that aims at understanding the genetic regulation of stress response and aging.
| An evolutionarily conserved phosphorylation cascade involving the insulin/insulin-like growth factor (IGF) receptor |
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| Post-translational control of DAF-16 and SKN-1 |
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Another level of DAF-16 modification is conferred by the C-Jun N-terminal kinase (JNK-1), a member of the mitogen-activated protein kinase (MAPK) superfamily. This signaling cascade is known to be activated by exposure to environmental stress. The activation of the JNK pathway by transgenic expression of jnk-1 results in increased tolerance for oxidative- and thermal stress in C. elegans (Oh et al. 2005). In addition, lifespan of the animals was increased up to 40%. This lifespan extension is fully dependent on functional daf-16 gene and JNK-1 was shown to directly phosphorylate DAF-16 to result in nuclear translocation. Therefore, the most likely explanation is that the insulin, sir-2, and JNK pathways act in parallel to converge on DAF-16. In contrast to the negative input of DAF-2 signaling, SIR-2 and JNK-1 may activate DAF-16 to control downstream genes via transcription.
| DAF-16 and other transcriptional effectors modulating insulin signaling |
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skn-1 is also an important developmental control gene that already functions in early embryogenesis. Therefore, the loss-of-function phenotype of this gene has to be overcome experimentally by maternally rescuing the embryonic defects in order to study its input in aging and stress response.
The skn-1 gene has an interesting expression pattern and its product is localized to the ASI sensory neuron pair and the intestine. This pattern is shared by other factors in insulin-modulating pathways that will be discussed below in more detail. Under standard laboratory conditions (no stress), SKN-1 in the two ASI neurons functions constitutively, whereas in the intestinal cells SKN-1 is phosphorylated by the glycogen synthase kinase (GSK-3), preventing its nuclear translocation (An et al. 2005). Upon oxidative stress, SKN-1 rapidly accumulates in the intestinal nuclei and transcriptionally activates gsc-1 (and probably other downstream targets) in a manner that depends on the p38 MAPK (Inoue et al. 2005). In summary, in addition to the central role of insulin signaling in the control of stress response, additional regulatory pathways also cope with oxidative stress and lifespan control. Both hsf-1 and skn-1 are induced under conditions of stress, and their induction extends lifespan. hsf-1 crosstalks with the insulin pathway and acts as a downstream effector of DAF-2 to determine longevity (Hsu et al. 2003), while a regulatory link between SKN-1 and the DAF-2/DAF-16 pathway still needs to be established. Such an interaction, however, is quite reasonable, given the interesting similarities between SKN-1 and DAF-16 function: both are regulated by post-transcriptional modifications, have overlapping expression patterns, both shuttle between cytoplasmic and nuclear compartments, and both, by inducing stress-response genes, affect lifespan in C. elegans.
| Steroid hormones relay signals from the germline for the regulation of lifespan |
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Is the consequence of eliminating the germline stem cells increasing lifespan by reducing the energy expenditure related to the development of progeny? Most likely not, since ablation of the entire gonad does not increase lifespan. Therefore, the most likely explanation is that there exists a counteracting signal from the somatic gonad that down-regulates DAF-2 insulin receptor activity (Arantes-Oliveira et al. 2002). Interestingly, the link between the germline and longevity is not unique to C. elegans. Similar effects have been described in both Drosophila and the mouse (Kenyon 2005).
| Insulin signaling couples to mechanisms that regulate oxidative stress |
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Several mutations that reduce insulin signaling in worms display an increased resistance to ROS-generating agents, most likely as a consequence of activation of detoxification enzymes. For example, daf-2 mutants display increased expression levels of sod-3, a manganese superoxide dismutase (Honda & Honda 1999). A protection from mitochondrial ROS production was shown for a mutant of isp-1 encoding the Rieske iron-sulfur protein of complex III of the ETC. The neomorphic mutant, isp-1(m150), displays a substantial increase in lifespan, correlating with a large decrease in oxygen consumption. This effect is similar to that of daf-2 mutants and indeed cannot be further increased in a daf-2 mutant background. This was used as an argument for the daf-2 longevity, phenotype being mostly determined by low ROS production. Protein carbonylation, a typical age-related protein modification as a consequence of oxidative damage, was also shown to be reduced in daf-2 mutants (Goto et al. 1999, Meissner et al. 2004).
| Dietary restriction and insulin signaling |
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| TOR- and insulin-signaling pathways converge for the control of stress resistance and longevity |
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In C. elegans, crosstalk between TOR and insulin signaling also modulates lifespan and stress resistance (Vellai et al. 2003, Kapahi et al. 2004, Meissner et al. 2004, Jia et al. 2004a). Strong mutations in the C. elegans TOR homolog let-363 result in L3 arrest (and a 25-day lifespan of the arrested larvae, as compared with 10 days for wild-type animals at these conditions), but weak reduction of let-363 by RNAi also extends lifespan, an effect that cannot be explained by reduced mitochondrial activity that might help to reduce ROS (Vellai et al. 2003). LET-363, together with DAF-15/regulatory associated protein of TOR (raptor) also act together to regulate dauer morphogenesis and fat storage (Jia et al. 2004b). The lifespan extension, but not the fat storage is dependent on DAF-16/ FOXO, indicating insulin-dependent and -independent mechanisms of the TOR pathway.
The amino acid homeostasis, to which TOR responds, is thought to be controlled by the activity of amino acid transporters and by the intestinal dipeptide transporter PEP-2 (Meissner et al. 2004). Expression of both DAF-15 and PEP-2 is negatively regulated by insulin signaling (Murphy et al. 2003). Deletion of pep-2 enhances a weak let-363(RNAi) phenotype and pep-2 is considered to act upstream of TOR (Meissner et al. 2004). In addition, while single mutants in pep-2 have no effect on lifespan, they strongly enhance the longevity phenotype of daf-2(e1370). Moreover, the double mutant revealed an astonishing resistance to the administration of paraquat as a source for oxidative stress. This was used as an additional argument that TOR acts both downstream and in parallel with insulin signaling in the worm. These results provided another example for the nutritional input into the control for the insulin pathway. PEP-2, homologous to human intestinal hPEPT1, has transport capacities exclusively for di- and tripeptides (Rubio-Aliaga & Daniel 2002). It is presently not known whether the predominant role of this transporter is in amino acid homeostasis, or whether dipeptides serve other regulatory or signaling functions.
| Food consumption, fat storage, and insulin signaling |
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| The effectors of DAF-2/DAF-16 insulin signaling |
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| The cell biology of insulin signaling in C. elegans |
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Through a number of experiments, it was determined that DAF-16 activity in the intestine is a requirement for lifespan extension in daf-2 mutant animals, whereas neuronal activity of DAF-16 only promoted dauer arrest (Libina et al. 2003). The consequent interpretation of these discrepancies would be that DAF-2 and DAF-16 do not necessarily have to act in the same cells. Gami and Wolkow (2006) suggested an explanation for this paradox by arguing that both cell autonomous and non-autonomous signaling may be involved in DAF-2 signaling, involving either feedback regulation by additional insulin-like ligands, downstream, or parallel pathways. Several observations seem to favor the last model. Mutations in both akt-1 and akt-2 are sufficient for constitutive dauer formation and nuclear translocation of DAF-16. Due to the blockade of the reproductive stage, the dauer mutants cannot be immediately tested for lifespan extension. When both were tested by RNAi, neither double RNAi mutant animals nor the combination of a mutation in one akt gene and impairment by RNAi of the other akt gene produced stress resistance or a strong lifespan extension. In contrast, the sgk-1(RNAi) animals (SKG-1 acts in parallel to AKT-1/AKT-2) showed robust longevity phenotypes similar to daf-2 animals (Hertweck et al. 2004), as well as oxidative stress resistance like daf-2. Lifespan of a sgk-1(ok538) mutant could not be tested due to its strong (developmental) egg-laying defect. However, in recent experiments, the Daf-c phenotype of akt-1; akt-2 double mutants was overcome by growing the worms on daf-16 RNAi expressing bacteria (Oh et al. 2005). Also, double RNAi against akt-1 and akt-2 in the sensitized rrf-3 mutant background, which enhances the effects of RNAi (M Hertweck, unpublished data), resulted in lifespan extension. RNAi efficacy is obviously different in distinct tissues, and tends to be least effective in the nervous system (Tavernarakis et al. 2000). Although these experimental discrepancies have not been resolved in every detail, the data suggest that insulin/IGF signaling in different tissues may have distinct effects and could respond to various inputs.
These and other data (Wolkow et al. 2000) imply that lifespan and dauer development are controlled by daf-2 expression in only a few cell types. Therefore, in order to regulate the necessary metabolic and anatomical changes in dauer animals, as well as to control aging, a secondary hormone must act as an endocrine regulator. The daf-9 gene, encoding a cytochrome P450 related to fatty acid and steroidogenic hydroxylases, has been identified as one candidate for such a link (Gerisch et al. 2001, Gerisch & Antebi 2004). A nuclear hormone receptor, DAF-12, which is bound by a hormone produced through DAF-9, has been identified (Antebi et al. 2000, Ludewig et al. 2004).
| Nuclear hormone receptors in C. elegans |
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The genome of the worm encodes 248 nuclear hormone receptors, indicating a remarkable, but poorly understood, expansion of the family that is not found in humans (48 receptors), e.g. Drosophila (21 receptors). As yet, only a small number of the corresponding genes has been analyzed in detail. They have been implicated in a number of functions, including roles in metabolism, the development and function of the nervous system, the determination of sex, developmental timing, and other developmental decisions, such as the molt or the entry into an alternative life stage called the dauer. For a detailed description, please see Antebi (2006).
In C. elegans, the signaling by insulin/IGF, together with TGF-ß and serotonin signaling, converge on the nuclear hormone receptor, DAF-12, to mediate either reproductive development or arrest at the dauer diapause. Factors related to DAF-12 include vitamin D, pregnane-X, liver-X, and androstane receptors (Antebi et al. 2000, Snow & Larsen 2000), which are bound by hormones derived from cholesterol. Cholesterol deprivation in C. elegans has indeed been shown to generate defects that phenotypically resemble daf-9 and daf-12 mutants with mutations in the ligand-binding domain (Gerisch et al. 2001, Jia et al. 2002). Therefore, daf-9 is thought to participate in the modification of cholesterol in the biosynthesis of steroid hormones. In the absence of hormone, the coregulator DAF-12 interacting protein (DIN)-1 binds to DAF-12 to promote dauer diapause and increased lifespan (Ludewig et al. 2004). DIN-1 encodes a homolog of human SHARP, a corepressor for nuclear receptors and transcription factors. The currently accepted model suggests that the DAF-12 transcriptional complex in the presence of a ligand specifies reproductive development (and short life), whereas in the absence of ligand, it serves as a switch to lifespan extension and dauer diapause. Ligands of DAF-12, cholesterol derivatives termed
4-dafachonic acid (3-keto-4-cholestenoic acid) and
7-dafachronic acid (3-keto-7,(5
)-cholestenoic acid) were recently described (Motola et al. 2006). Synthetic
4-dafachonic acid has been shown to activate DAF-12, blocks binding of the DAF-12 corepressor DIN-1, and rescues daf-9 mutant phenotypes at nanomolar concentrations. Moreover, this steroid also rescued both daf-7/TGF-ß and weak daf-2 mutants, confirming the position of both genes upstream of daf-9/ daf-12. A genetic mutant in daf-36 behaves like daf-9 and blocks longevity mediated by elimination of the germline (Rottiers et al. 2006). daf-36 encodes an enzyme corresponding to Rieske-like oxygenases and participates in the production of the DAF-12 ligand (see review in Beckstead & Thummel 2006).
| Conclusion |
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Age is the most critical risk factor for Alzheimers and Parkinsons disease, cardiovascular diseases, stroke, and cancer, the prevailing causes of death in the civilized world. Interesting similarities are emerging that, e.g. link some of the risk factors of hereditary cases of Parkinsons disease to oxidative stress and mitochondrial (dys-)functions (Dawson & Dawson 2003). Insulin signaling may, thus, not only be involved in the regulation of oxidative stress response and longevity, but also it is quite likely that we will soon discover a potent role in other degenerative disease mechanisms involving cellular stress. Strategies aimed at reducing oxidative stress may, therefore, hold promise not only as powerful neuroprotective agents in the treatment of Parkinsons disease, but may also help to delay general aspects of cell aging. The availability of C. elegans models that allow pharmacological and genetic screenings in high throughput (Braungart et al. 2004, Jones et al. 2005, Springer et al. 2005) offers a unique opportunity to identify such compounds.
| Acknowledgements |
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Received 7 March 2006
Received in final form 28 April 2006
Accepted 2 May 2006
Made available online as an Accepted Preprint 23 May 2006
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